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Series GSE130194 Query DataSets for GSE130194
Status Public on Aug 22, 2019
Title Genome-wide maps of chromatin state in HeLa cells.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report a series of ChIP-Seq results in HeLa cells. Briefly, we performed ChIP-Seq experiments with antibodies specific for Snail, MTA1, and PRMT5 in HeLa cells. We found that Snail, MTA1, and PRMT5 had similar binding motifs. This study gave us a new understanding of the role of Snail in chromatin status and gene transcription.
Overall design Examination of Snail, MTA1, and PRMT5 target genes in HeLa cell line.
Contributor(s) Gao J, Liu R, Wang Y
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Submission date Apr 23, 2019
Last update date Aug 23, 2019
Contact name Jie Gao
Organization name School of Basic Medical Sciences, Capital Medical University
Department Department of Biochemistry and Molecular Biology
Street address No. 10, Xitoutiao, You An Men, Fengtai District
City Beijing
ZIP/Postal code 100069
Country China
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (4)
GSM3733670 HeLa: input DNA
GSM3733671 HeLa: Snail_ChIPSeq
GSM3733672 HeLa: MTA1_ChIPSeq
BioProject PRJNA534261
SRA SRP193479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130194_RAW.tar 2.0 Gb (http)(custom) TAR (of BW, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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