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Series GSE129735 Query DataSets for GSE129735
Status Public on Jan 27, 2020
Title KDM4A mediates maternal zygotic transition in mammals
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32231309
Submission date Apr 12, 2019
Last update date Apr 27, 2020
Contact name Aditya Sankar
E-mail(s) cnj376@ku.dk, aditya.sankar@embl.de
Organization name University of Copenhagen
Department Biotech Research and Innovation Centre
Lab Helin
Street address Ole Maaloes Vej 5
City Copenhagen
ZIP/Postal code 2200
Country Denmark
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (164)
GSM3720920 H3K4me3_WT1
GSM3720921 H3K4me3_WT2
GSM3720922 H3K4me3_KO1
This SuperSeries is composed of the following SubSeries:
GSE129729 Genome-wide maps of H3K4me3, H3K9me3 chromatin states in control and Kdm4a knockout oocytes
GSE129731 SMARTSeq_v4 paired end mRNA Seq of Kdm4a control mutant oocytes and preimplantation embryos
GSE129733 Total Stranded paired end RNA Seq of wildtype and knockout Kdm4a 2 cell embryos
Relations
BioProject PRJNA532603

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129735_RAW.tar 921.3 Mb (http)(custom) TAR (of TXT, WIG)
SRA Run SelectorHelp
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