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| Status |
Public on Apr 13, 2019 |
| Title |
Genomic profiling of yeast resistance to food carcinogens |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Other
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| Summary |
96 genes were identified as conferring aflatoxin resistance and 114 genes were identified as conferring resistance to IQ.
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| Overall design |
Two diploid yeast deletion collections expressing human CYP1A2 or human CYP1A2 and NAT2 was exposed to aflatoxin B1
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| Contributor(s) |
Doyle F, Fasullo M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Apr 12, 2019 |
| Last update date |
Jun 04, 2020 |
| Contact name |
Michael Thomas Fasullo |
| E-mail(s) |
mfasullo@sunypoly.edu
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| Phone |
5189567385
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| Organization name |
SUNY Polytechnic Institute
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| Department |
Nanobioscience
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| Street address |
257 Fuller Road
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| City |
Albany |
| State/province |
New York |
| ZIP/Postal code |
12205 |
| Country |
USA |
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| Platforms (1) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
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| Samples (30)
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| GSM3720383 |
DMSO control for AFB1 yeast cells expressing CYP1A2, 1 |
| GSM3720384 |
DMSO control for AFB1 yeast cells expressing CYP1A2, 2 |
| GSM3720385 |
DMSO control for AFB1 yeast cells expressing CYP1A2, 3 |
| GSM3720386 |
AFB1 yeast cells expressing CYP1A2 , 1 |
| GSM3720387 |
AFB1 yeast cells expressing CYP1A2 , 2 |
| GSM3720388 |
AFB1 yeast cells expressing CYP1A2 , 3 |
| GSM3720389 |
DMSO control for AFB1 yeast cells expressing CYP1A2 and NAT2, 1 |
| GSM3720390 |
DMSO control for AFB1 yeast cells expressing CYP1A2 and NAT2, 2 |
| GSM3720391 |
DMSO control for AFB1 yeast cells expressing CYP1A2 and NAT2, 3 |
| GSM3720392 |
AFB1 yeast cells expressing CYP1A2 and NAT2, 1 |
| GSM3720393 |
AFB1 yeast cells expressing CYP1A2 and NAT2, 2 |
| GSM3720394 |
AFB1 yeast cells expressing CYP1A2 and NAT2, 3 |
| GSM4589825 |
DMSO control for AFB1, yeast cells (BY4743 library), 1 |
| GSM4589826 |
DMSO control for AFB1, yeast cells (BY4743 library), 2 |
| GSM4589827 |
DMSO control for AFB1, yeast cells (BY4743 library), 3 |
| GSM4589828 |
AFB1, yeast cells (BY4743 library), 1 |
| GSM4589829 |
AFB1, yeast cells (BY4743 library), 2 |
| GSM4589830 |
AFB1, yeast cells (BY4743 library), 3 |
| GSM4589831 |
DMSO control for AFB1, yeast cells expressing CYP1A2, 1 |
| GSM4589832 |
DMSO control for AFB1, yeast cells expressing CYP1A2, 2 |
| GSM4589833 |
DMSO control for AFB1, yeast cells expressing CYP1A2, 3 |
| GSM4589834 |
AFB1, yeast cells expressing CYP1A2, 1 |
| GSM4589835 |
AFB1, yeast cells expressing CYP1A2, 2 |
| GSM4589836 |
AFB1, yeast cells expressing CYP1A2, 3 |
| GSM4589837 |
DMSO control for AFB1, yeast cells expressing CYP1A2 and NAT2, 1 |
| GSM4589838 |
DMSO control for AFB1, yeast cells expressing CYP1A2 and NAT2, 2 |
| GSM4589839 |
DMSO control for AFB1, yeast cells expressing CYP1A2 and NAT2, 3 |
| GSM4589840 |
AFB1, yeast cells expressing CYP1A2 and NAT2, 1 |
| GSM4589841 |
AFB1, yeast cells expressing CYP1A2 and NAT2, 2 |
| GSM4589842 |
AFB1, yeast cells expressing CYP1A2 and NAT2, 3 |
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| Relations |
| BioProject |
PRJNA532529 |
| SRA |
SRP192307 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE129699_B5ULANXX_AFB1_DMSO_Results.xlsx.gz |
351.3 Kb |
(ftp)(http) |
XLSX |
| GSE129699_B5ULANXX_Barcode_Counts_AFB1_DMSO.xlsx.gz |
246.3 Kb |
(ftp)(http) |
XLSX |
| GSE129699_C69C4ACXX_AFB1_DMSO_Results.xlsx.gz |
284.6 Kb |
(ftp)(http) |
XLSX |
| GSE129699_C69C4ACXX_Barcode_Counts_AFB1_DMSO.xlsx.gz |
237.3 Kb |
(ftp)(http) |
XLSX |
| GSE129699_C8B0CANXX_Results__CYP1A2_uptag_only__DMSO_AFB1.xls.gz |
198.9 Kb |
(ftp)(http) |
XLS |
| GSE129699_C8B0CANXX_Results__CYP1A2nat214_uptag_only__DMSO_AFB1.xls.gz |
178.4 Kb |
(ftp)(http) |
XLS |
| GSE129699_C8B0CANXX_Results__No_CYP_uptag_only__DMSO_AFB1.xls.gz |
237.0 Kb |
(ftp)(http) |
XLS |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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