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Series GSE129341 Query DataSets for GSE129341
Status Public on Nov 30, 2019
Title Comparative Analysis of TTF-1 Binding DNA Regions in Small Cell Lung Cancer and Non-Small Cell Lung Cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31782890
Submission date Apr 04, 2019
Last update date Dec 01, 2019
Contact name Daizo Koinuma
E-mail(s) d-koinuma@umin.ac.jp
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (17)
GSM3704420 TTF-1 binding region in NCI-H209
GSM3704421 ASCL1 binding region in NCI-H209
GSM3704422 Input genomic DNA, NCI-H209
This SuperSeries is composed of the following SubSeries:
GSE129312 TTF-1/NKX2-1 and ASCL1 binding regions in a small cell lung carcinoma cell line, NCI-H209
GSE129340 RNA-seq transcriptome analysis in NCI-H209 and NCI-H441 cells transfected with TTF-1/NKX2-1 or ASCL1 siRNAs.
GSE139868 TTF-1/NKX2-1 and ASCL1 binding regions in NCI-H209 and NKX2-1 binding regions in NCI-H441, replicate 2
Relations
BioProject PRJNA530969

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129341_RAW.tar 1.6 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp

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