GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE127699 Query DataSets for GSE127699
Status Public on May 12, 2020
Title Bulk RNA-Seq analysis of WT and Bach2-deficient Foxp3+ Treg cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary These are the FastQ files used for the RNA-seq analysis of WT and Bach2-deficient splenic Foxp3+ Treg cells.
Overall design RNA-seq profiles from Bach2high and Bach2low EGFP+ Treg, purified by FACS from Foxp3EGFP-DTR Bach2tdRFP/+ mice, were generated by deep sequencing using Illumina HiSeq2500.
Contributor(s) Sadiyah M
Citation(s) 32515782
Submission date Mar 01, 2019
Last update date Aug 17, 2020
Contact name Mohammed-Firas Sadiyah
Organization name University of Cambridge
Street address The Old Schools, Trinity Ln
City Cambridge
ZIP/Postal code CB2 1TN
Country United Kingdom
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM3636573 Foxp3-GFP+Treg_cKO_Rep1_RNA-seq
GSM3636574 Foxp3-GFP+Treg_cKO_Rep2_RNA-seq
GSM3636575 Foxp3-GFP+Treg_cKO_Rep3_RNA-seq
This SubSeries is part of SuperSeries:
GSE128176 BACH2 is repurposed following Treg lineage commitment to drive the functional quiescence and maintenance of resting Treg cells
BioProject PRJNA527353
SRA SRP188609

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE127699_RNA-seq_Foxp3-GFP_cKO_cuffnorm_genes.fpkm.txt.gz 462.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap