GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE127408

Query DataSets for GSE127408

Status

Public on Mar 03, 2019

Title

ChIP-seq from HepG2 (ENCSR112ALD)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

CREB1 ChIP-seq on human HepG2

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR112ALD/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 28, 2019

Last update date

Mar 27, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM3634243	ChIP-seq from HepG2 (ENCLB296HFM)
GSM3634244	ChIP-seq from HepG2 (ENCLB955KHX)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE127408_ENCFF130QTI_conservative_idr_thresholded_peaks_hg19.bigBed	1.0 Mb	(ftp)(http)	BIGBED
GSE127408_ENCFF161PGD_optimal_idr_thresholded_peaks_hg19.bed.gz	735.9 Kb	(ftp)(http)	BED
GSE127408_ENCFF228LSW_conservative_idr_thresholded_peaks_GRCh38.bed.gz	591.6 Kb	(ftp)(http)	BED
GSE127408_ENCFF350CSQ_conservative_idr_thresholded_peaks_GRCh38.bigBed	1.0 Mb	(ftp)(http)	BIGBED
GSE127408_ENCFF365ROK_peaks_and_background_as_input_for_IDR_hg19.bed.gz	6.8 Mb	(ftp)(http)	BED
GSE127408_ENCFF408ICU_fold_change_over_control_hg19.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE127408_ENCFF414DXJ_peaks_and_background_as_input_for_IDR_GRCh38.bed.gz	6.8 Mb	(ftp)(http)	BED
GSE127408_ENCFF550TXR_optimal_idr_thresholded_peaks_GRCh38.bed.gz	755.6 Kb	(ftp)(http)	BED
GSE127408_ENCFF624QRH_peaks_and_background_as_input_for_IDR_hg19.bigBed	11.0 Mb	(ftp)(http)	BIGBED
GSE127408_ENCFF642YGX_optimal_idr_thresholded_peaks_GRCh38.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE127408_ENCFF727DNJ_signal_p-value_hg19.bigWig	1.9 Gb	(ftp)(http)	BIGWIG
GSE127408_ENCFF759XLA_optimal_idr_thresholded_peaks_hg19.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE127408_ENCFF829GZL_signal_p-value_GRCh38.bigWig	1.7 Gb	(ftp)(http)	BIGWIG
GSE127408_ENCFF835UPN_conservative_idr_thresholded_peaks_hg19.bed.gz	579.1 Kb	(ftp)(http)	BED
GSE127408_ENCFF853TTW_fold_change_over_control_GRCh38.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE127408_ENCFF907ARJ_peaks_and_background_as_input_for_IDR_GRCh38.bigBed	11.1 Mb	(ftp)(http)	BIGBED
GSE127408_RAW.tar	11.3 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file