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GEO accession:
Series GSE127144
Query DataSets for GSE127144
Status
Public on Jun 06, 2020
Title
Cytokine-sensing primary enhancer cluster launches secondary enhancers to activate multi-gene locus
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33854063
Submission date
Feb 25, 2019
Last update date
Nov 28, 2024
Contact name
Michaela Willi
Organization name
NIH
Department
NIDDK
Street address
9000 Rockville Pike
City
Bethesda
ZIP/Postal code
20814
Country
USA
Platforms (1)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
Samples (99)
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More...
GSM3629402
ChIP-seq-WT-L1-NFIB-rep1
GSM3629403
ChIP-seq-WT-L1-NFIB-rep2
GSM3629404
ChIP-seq-WT-L1-H3K4me3-rep1
GSM3629405
ChIP-seq-WT-L1-H3K4me3-rep2
GSM3629406
ChIP-seq-WT-L1-H3K4me3-rep3
GSM3629408
ChIP-seq-WT-p6-H3K27ac-rep1
GSM3629409
ChIP-seq-WT-p6-H3K27ac-rep2
GSM3629410
ChIP-seq-delS1-L1-STAT5A-rep1
GSM3629411
ChIP-seq-delS1-L1-STAT5A-rep2
GSM3629412
ChIP-seq-delS1-L1-H3K27ac-rep1
GSM3629413
ChIP-seq-delS1-L1-H3K27ac-rep2
GSM3629414
ChIP-seq-delS2-L1-STAT5A-rep1
GSM3629415
ChIP-seq-delS2-L1-STAT5A-rep2
GSM3629416
ChIP-seq-delS2-L1-H3K27ac-rep1
GSM3629417
ChIP-seq-delS2-L1-H3K27ac-rep2
GSM3629418
ChIP-seq-delS4-L1-STAT5A-rep1
GSM3629419
ChIP-seq-delS4-L1-STAT5A-rep2
GSM3629420
ChIP-seq-delS4-L1-H3K27ac-rep1
GSM3629421
ChIP-seq-delS4-L1-H3K27ac-rep2
GSM3629422
ChIP-seq-delS1-2-L1-STAT5A-rep1
GSM3629423
ChIP-seq-delS1-2-L1-STAT5A-rep2
GSM3629424
ChIP-seq-delS1-2-L1-GR-rep1
GSM3629425
ChIP-seq-delS1-2-L1-GR-rep2
GSM3629426
ChIP-seq-delS1-2-L1-H3K27ac-rep1
GSM3629427
ChIP-seq-delS1-2-L1-H3K27ac-rep2
GSM3629428
ChIP-seq-delS1-4-L1-STAT5A-rep1
GSM3629429
ChIP-seq-delS1-4-L1-STAT5A-rep2
GSM3629430
ChIP-seq-delS1-4-L1-GR-rep1
GSM3629431
ChIP-seq-delS1-4-L1-GR-rep2
GSM3629432
ChIP-seq-delS1-4-L1-H3K27ac-rep1
GSM3629433
ChIP-seq-delS1-4-L1-H3K27ac-rep2
GSM3629434
ChIP-seq-delS1-4-L1-H3K4me3-rep1
GSM3629435
ChIP-seq-delS1-4-L1-H3K4me3-rep2
GSM3629436
ChIP-seq-delS1-4-L1-PolII-rep1
GSM3629437
ChIP-seq-delS1-4-L1-PolII-rep2
GSM3629450
RNA-seq-WT1_p6
GSM3629451
RNA-seq-WT2_p6
GSM3629452
RNA-seq-WT3_p6
GSM3629453
RNA-seq-WT1_p18
GSM3629454
RNA-seq-WT2_p18
GSM3629455
RNA-seq-WT3_p18
GSM3629456
RNA-seq-Csn_S1-4-1_p6
GSM3629457
RNA-seq-Csn_S1-4-2_p6
GSM3629458
RNA-seq-Csn_S1-4-3_p6
GSM3629459
RNA-seq-Csn_S1-4-4_p6
GSM3629460
RNA-seq-Csn_S1-4-1_p18
GSM3629461
RNA-seq-Csn_S1-4-2_p18
GSM3629462
RNA-seq-Csn_S1-4-3_p18
GSM3629463
RNA-seq-Csn_S1-4-4_p18
GSM3629466
4C_WT1
GSM3629467
4C_WT2
GSM3629468
4C_WT3
GSM3629469
4C_WT4
GSM3629470
4C_Csn-S1-4-rep1
GSM3629471
4C_Csn-S1-4-rep2
GSM3629472
Hi-C-WT-L1
GSM4291717
ChIP-seq-delCsn3-DE-L1-STAT5A-rep1
GSM4291718
ChIP-seq-delCsn3-DE-L1-STAT5A-rep2
GSM4291719
ChIP-seq-delCsn3-DE-L1-GR-rep1
GSM4291720
ChIP-seq-delCsn3-DE-L1-GR-rep2
GSM4291721
ChIP-seq-delCsn3-DE-L1-H3K27ac-rep1
GSM4291722
ChIP-seq-delCsn3-DE-L1-H3K27ac-rep2
GSM4295154
ChIP-seq-WT-L1-H3K4me1-rep1
GSM4295155
ChIP-seq-WT-L1-H3K4me1-rep2
GSM4295156
ChIP-seq-WT-L1-Pol2-rep1
GSM4295157
ChIP-seq-WT-L1-Pol2-rep2
GSM4295158
ChIP-seq-WT-p6-MED1-rep1
GSM4295159
ChIP-seq-WT-p6-MED1-rep2
GSM4295160
ChIP-seq-WT-p6-GR-rep1
GSM4295161
ChIP-seq-WT-p6-GR-rep2
GSM4295162
ChIP-seq-WT-p6-STAT5A-rep1
GSM4295163
ChIP-seq-WT-p6-STAT5A-rep2
GSM4295164
ChIP-seq-delS1-4-p6-H3K27ac-rep1
GSM4295165
ChIP-seq-delS1-4-p6-H3K27ac-rep2
GSM4295166
ChIP-seq-delS1-4-p6-GR-rep1
GSM4295167
ChIP-seq-delS1-4-p6-GR-rep2
GSM4295168
ChIP-seq-delS1-4-p6-STAT5A-rep1
GSM4295169
ChIP-seq-delS1-4-p6-STAT5A-rep2
GSM4295170
ChIP-seq-delCsn3-PE-L1-GR-rep1
GSM4295171
ChIP-seq-delCsn3-PE-L1-GR-rep2
GSM4295172
ChIP-seq-delCsn3-PE-L1-H3K27ac-rep1
GSM4295173
ChIP-seq-delCsn3-PE-L1-H3K27ac-rep2
GSM4295174
ChIP-seq-delCsn3-PE-L1-Pol2-rep1
GSM4295175
ChIP-seq-delCsn3-PE-L1-Pol2-rep2
GSM4295176
ChIP-seq-delCsn3-PE-L1-STAT5A-rep1
GSM4295177
ChIP-seq-delCsn3-PE-L1-STAT5A-rep2
GSM4295178
ChIP-seq-delCsn1s2b-E-GR-L1-rep1
GSM4295179
ChIP-seq-delCsn1s2b-E-GR-L1-rep2
GSM4295180
ChIP-seq-delCsn1s2b-E-Pol2-L1-rep1
GSM4295181
ChIP-seq-delCsn1s2b-E-Pol2-L1-rep2
GSM4295182
ChIP-seq-delCsn1s2b-E-H3K27ac-L1-rep1
GSM4295183
ChIP-seq-delCsn1s2b-E-H3K27ac-L1-rep2
GSM4295184
ChIP-seq-delCsn1s2b-E-STAT5A-L1-rep1
GSM4295185
ChIP-seq-delCsn1s2b-E-STAT5A-L1-rep2
GSM4296547
RNA-seq-delCsn3-PE-1_p18
GSM4296548
RNA-seq-delCsn3-PE-2_p18
GSM4296549
RNA-seq-delCsn1s2b-E-1_p18
GSM4296550
RNA-seq-delCsn1s2b-E-2_p18
GSM4296551
RNA-seq-delCsn1s2b-E-3_p18
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE127139
Cytokine-sensing primary enhancer cluster launches secondary enhancers to activate multi-gene locus [ChIP-seq]
GSE127140
Cytokine-sensing primary enhancer cluster launches secondary enhancers to activate multi-gene locus [RNA-seq]
GSE127142
Cytokine-sensing primary enhancer cluster launches secondary enhancers to activate multi-gene locus [4C-seq]
GSE127143
Cytokine-sensing primary enhancer cluster launches secondary enhancers to activate multi-gene locus [Hi-C]
Relations
BioProject
PRJNA524195
Download family
Format
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File type/resource
GSE127144_RAW.tar
52.5 Gb
(http)
(custom)
TAR (of BEDGRAPH, HIC, TXT)
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