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Series GSE126679 Query DataSets for GSE126679
Status Public on Feb 19, 2019
Title MicroRNA expression in human lymphatic endothelial cells (LEC) and blood endothelial cells (BEC)
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This experiment was aim to identify differentially expressed miRNAs from cultured human LEC and BEC using microRNA-seq.
 
Overall design RNA was isolated from cultured human LEC and BEC. Libraries were prepared using the Illumina TruSeq Small RNA Sample Preparation Kit, then sequenced on a NextSeq 500 Illumina instrument, generating 50 bp single-end reads. Data was analyzed using PartekFlow analysis software
 
Contributor(s) Jung H, Weinstein B
Citation(s) 31478836
Submission date Feb 18, 2019
Last update date Sep 11, 2019
Contact name Hyun Min Jung
E-mail(s) hyunmin.jung@nih.gov
Phone 301-496-7940
Organization name National Institutes of Health
Department Division of Developmental Biology
Lab Weinstein Lab
Street address 6 Center Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM3611143 HUVEC replicate 1
GSM3611144 HUVEC replicate 2
GSM3611145 HUVEC replicate 3
Relations
BioProject PRJNA522973
SRA SRP186158

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126679_HMVEC_vs_HUVEC.txt.gz 31.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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