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Series GSE126536 Query DataSets for GSE126536
Status Public on Feb 15, 2019
Title H3K27-ac ChIP-seq with rorc knockdown in mouse KPC cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary H3K27-ac ChIP-seq with rorc knockdown in mouse KPC cell
 
Overall design H3K27-acetyl ChIP-seq comparative analysis of shControl and shRorc infected mouse KPC cells
 
Contributor(s) Lytle N, Reya T
Citation(s) 30955884
Submission date Feb 13, 2019
Last update date Sep 26, 2019
Contact name Michael Hamilton
E-mail(s) mihamilton@ucsd.edu
Phone 5303123999
Organization name UCSD
Street address 2880 Torrey Pines Scenic Dr.
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (5)
GSM3603197 KPC9 input
GSM3603198 KPC9 shCtrl
GSM3603199 KPC9 shRorc
Relations
BioProject PRJNA522282
SRA SRP185850

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126536_KPC4_9_Musashi_overlap_summary_extended.xlsx 5.7 Kb (ftp)(http) XLSX
GSE126536_KPC9.changed.SE.IPA.summary.xls.gz 158.3 Kb (ftp)(http) XLS
GSE126536_KPC9.shROR.SE.only.IPA.summary.xls.gz 158.1 Kb (ftp)(http) XLS
GSE126536_RAW.tar 778.0 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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