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| Status |
Public on Oct 18, 2019 |
| Title |
Transcriptomic studies in the development and ripening of strawberry fruits (Agilent) |
| Organism |
Fragaria x ananassa |
| Experiment type |
Expression profiling by array
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| Summary |
Strawberry is an ideal model for studying the molecular biology of the development and ripening of non-climacteric fruits. By using a custom-made and high quality oligo microarray platform done with over
32000 probes including all of the genes actually described in the strawberry genome, we have analyzed the expression of genes during the development and ripening in the receptacles of these fruits.
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| Overall design |
A custom-made oligo microarray (60-mer length) platform (FraGenomics 35k) containing a total of 35234 singletons corresponding to those sequences published in the strawberry genome project (http://www.strawberry.org). For each sequence, 4 different oligos were printed per block and four blocks were printed per data set. We have analyzed two control samples green fruits, and two samples of red fruits
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| Contributor(s) |
Muñoz-Blanco J, Medina-Puche L, Molina-Hidalgo FJ, Blanco-Portales R |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Feb 07, 2019 |
| Last update date |
Jan 20, 2020 |
| Contact name |
Francisco Javier Molina-Hidalgo |
| Organization name |
University of Cordoba
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| Department |
Biochemistry and molecular biology
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| Street address |
Edif. Severo Ochoa (C6.) Planta Baja-Ala Norte Campus de Rabanales
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| City |
CÓRDOBA |
| State/province |
Cordoba |
| ZIP/Postal code |
14071 |
| Country |
Spain |
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| Platforms (1) |
| GPL26165 |
037907-Agilent Fragaria x ananassa FraGenomics 35k [Probe name version] |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA521350 |
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