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Series GSE125702 Query DataSets for GSE125702
Status Public on Jan 27, 2019
Title Expression data from parental and SLX4IP-depleted D2.OR cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Loss of SLX4IP elicits the metastatic outgrowth of nonmetastatic breast cancer cells by activating Wnt signaling to induce telomere maintenance mechanism switching
We sought to assess genome-wide transcriptomic profiles governed by loss of SLX4IP expression in latent D2.OR breast cancer cells
Overall design We propagated parental and SLX4IP-depleted D2.OR cells in 3D-culture for 7 days, at which point total RNA was isolated and subsequently subjected to Affymetrix GeneChip Mouse Gene 2.0 ST Array analysis. Arrays were peformed in triplicate for each cell line.
Contributor(s) Schiemann WP, Robinson NJ
Citation(s) 32071280
Submission date Jan 26, 2019
Last update date Mar 02, 2020
Contact name William Schiemann
Organization name Case Western Reserve University
Department Case Comprehensive Cancer Center
Street address 2103 Cornell Rd.
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM3580634 D2.OR Scram Biological Rep 1
GSM3580635 D2.OR Scram Biological Rep 2
GSM3580636 D2.OR Scram Biological Rep 3
BioProject PRJNA517271

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125702_RAW.tar 51.1 Mb (http)(custom) TAR (of CEL, CHP)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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