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Series GSE125382 Query DataSets for GSE125382
Status Public on Jul 08, 2019
Title Gene expression profiling of human colon cancer cell lines implanted in colon and liver of mice
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA was isolated from individual macrodissected tumors 4 weeks post implantation.
The "SAMPLE_ID" sample characteristic is a sample identifier internal to Genentech.
The ID of this project in Genentech's ExpressionPlot database is PRJ0019861
Overall design Gene expression profiling of colorectal cell lines after their orthotopic implantation in the colon through induced rectal prolapse or in the liver through a modified hydrodynamic tail vein injection
Contributor(s) Piskol R, de Sousa e Melo F
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Submission date Jan 20, 2019
Last update date Jul 11, 2019
Contact name Robert Piskol
Organization name Genentech Inc.
Department Bioinformatics
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (40)
GSM3573091 SAM24358389 RKO_Colon 1
GSM3573092 SAM24358390 RKO_Colon 2
GSM3573093 SAM24358391 RKO_Colon 3
BioProject PRJNA516064
SRA SRP180873

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125382_RAW.tar 10.9 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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