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Series GSE12508 Query DataSets for GSE12508
Status Public on Aug 11, 2009
Title Transcription patterns during wheat development
Organism Triticum aestivum
Experiment type Expression profiling by array
Summary The analysis of gene expression during wheat development:
Gene expression measurements were carried out on a developmental tissue
series for wild-type wheat (cv. Chinese Spring) using the Affymetrix
Wheat GeneChip. Thirteen tissues at defined developmental stages were
chosen to match the barley (cv. Morex) tissue series of Druka et al.
2006 that used the Affymetrix Barley1 GeneChip. Three replicates of:
root tissue at two different developmental stages, leaf, crown,
caryopsis, anther, pistil, inflorescence, bracts, mesocotyl, endosperm,
embryo and coleoptiles were hybridised. Comparisons between this wheat
data and the barley dataset were performed and are available at

[PLEXdb( has submitted this series at GEO on behalf of the original contributor, Tim Sutton. The equivalent experiment is TA3 at PLEXdb.]
Overall design tissue type: germinating seed, coleoptile(3-replications); tissue type: germinating seed, root(3-replications); tissue type: germinating seed, embryo(3-replications); tissue type: seedling, root(3-replications); tissue type: seedling, crown(3-replications); tissue type: seedling, leaf(3-replications); tissue type: immature inflorescence(3-replications); tissue type: floral bracts, before anthesis(3-replications); tissue type: pistil, before anthesis(3-replications); tissue type: anthers, before anthesis(3-replications); tissue type: 3-5 DAP caryopsis(3-replications); tissue type: 22 DAP embryo(3-replications); tissue type: 22 DAP endosperm(3-replications)
Web link
Contributor(s) Sutton T
Citation(s) 19558723
Submission date Aug 20, 2008
Last update date Dec 04, 2018
Contact name PLEXdb Curator, Sudhansu Dash
Organization name Iowa State University
Department Virtual Reality Application Center
Lab PLEXdb
Street address 1023 Crop Genomes Informatics Lab (Iowa State University)
City Ames
State/province IA
ZIP/Postal code 50011
Country USA
Platforms (1)
GPL3802 [wheat] Affymetrix Wheat Genome Array
Samples (39)
GSM314251 tissue type: germinating seed, coleoptile - rep1
GSM314252 tissue type: germinating seed, coleoptile - rep2
GSM314253 tissue type: germinating seed, coleoptile - rep3
BioProject PRJNA113259

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12508_RAW.tar 320.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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