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Series GSE124998 Query DataSets for GSE124998
Status Public on Apr 17, 2019
Title A Cut/cohesin axis altersthe chromatin landscape to facilitate neuroblast death
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Cut regulates the programmed death of neural stem cells by altering cohesin levels and promoting a more open chromatin conformation to allow cell death gene expression.
 
Overall design Histone modification (H3K27Me3 and H3K27Ac) in sorted neuroblast cells was monitored following RNAi KD of Cut.
 
Contributor(s) White K, Zhou L
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Submission date Jan 11, 2019
Last update date Apr 20, 2019
Contact name Lei Zhou
E-mail(s) leizhou@ufl.edu
Phone 3522738169
Organization name University of Florida
Department Molecular Genetics and Microbiology
Lab Huang & Zhou
Street address 2600 Mowry rd
City Gainesville
State/province FL
ZIP/Postal code 32610
Country USA
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (4)
GSM3560800 Cut_KD_H3K27Me3
GSM3560801 Control_H3K27Me3
GSM3560802 Cut_KD_H3K27Ac
Relations
BioProject PRJNA514805
SRA SRP178571

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124998_RAW.tar 41.6 Mb (http)(custom) TAR (of BB, BROADPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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