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| Status |
Public on Feb 24, 2021 |
| Title |
Agaricus bisporus respiratory bursts |
| Organism |
Agaricus bisporus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Respiratory bursts were observed in A. bisporus. CO2 production and O2 consumption increased up to 3.5 fold during these 3 h bursts while compost temperature increased up to 3 °C. We set out to find which pathways were characteristic for these bursts and the interval between these bursts.
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| Overall design |
Total RNA expression by Agaricus bisporus production strain A15, was analyzed during respiratory bursts, after a burst and in the interval between two bursts (i.e. ~0.5 h, 4.5 h, and 8.5 h after a burst started, respectively), by Illumina sequencing. In total 9 samples were sequenced, each sample point of a burst having each 3 replicates.
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| Contributor(s) |
Vos AM, Bleichrodt R, Herman KC, Ohm RA, Schmitt H, Lugones LG, Wösten HA |
| Citation(s) |
33140552 |
| |
| Submission date |
Jan 11, 2019 |
| Last update date |
Feb 24, 2021 |
| Contact name |
Robert-Jan Bleichrodt |
| E-mail(s) |
r.bleichrodt@uu.nl
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| Organization name |
Utrecht University
|
| Street address |
Padualaan 8
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| City |
Utrecht |
| ZIP/Postal code |
3584CH |
| Country |
Netherlands |
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| Platforms (1) |
| GPL26034 |
Illumina HiSeq 2500 (Agaricus bisporus) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA514729 |
| SRA |
SRP178526 |
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