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Series GSE124036 Query DataSets for GSE124036
Status Public on Dec 01, 2021
Title Role of neuronal Xlr4 gene expression in cocaine addiction vulnerability: a microarray study in medial prefrontal cortex and Nucleus Accumbens of C57 and DBA mice.
Organism Mus musculus
Experiment type Expression profiling by array
Summary Although several studies have been performed in rodents, non-human primates and humans, the biological basis of vulnerability to develop cocaine addiction remains largely unknown. Exposure to critical early events (as repeated cross fostering (RCF)) has been reported to increase sensitivity to cocaine in adult C57BL/6J female mice. Here we reasoned that by comparing the RCF-induced genes expression alterations in the NAc of adult mice (3 months of age) from two inbred strains (C57 and DBA), we could be able to identify critical genes underlying the adult behavioral phenotype. By a microarray analysis of gene expression (Agilent paltform)in the NAc of adult animals we found, among the several genes modulated, only 2 genes, the X-linked lymphocyte-regulated 4a and 4b (Xlr4a, Xlr4b), that were simultaneously modulated by the early experience in the two strains, but, notably, in opposite direction. All together, these data strongly indicate a critical role for Xlr4, a new yet unexplored candidate gene, in mediating vulnerability to cocaine addiction in mouse.
 
Overall design A total of n=31 samples were processed, with 4 samples/group except one group with only 3 samples (C57_mpFC_ctr). The samples are divided into 8 experimental groups, based on the three factors: strain (2 levels=C57 or DBA) X tissue (2 levels=mpFC or Nac) X treatment (2 levels= control or RCF).
 
Contributor(s) Di Segni M, Andolina D, D'Addario S, Babicola L, Lelpo D, Luchetti A, Pascucci T, Mancini C, Accoto A, Lo Iacono L, Francesca D, Brandi R, Arisi I, Turturro S, D'Onofrio M, Ventura R
Citation(s) 32113966
Submission date Dec 18, 2018
Last update date Mar 02, 2022
Contact name Ivan Arisi
E-mail(s) i.arisi@ebri.it
Phone +39-06-49255230
Organization name European Brain Research Institute
Department Bioinformatics Facility
Street address viale Regina Elena 295
City Roma
ZIP/Postal code 00161
Country Italy
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (31)
GSM3519206 C57_mpFC_ctr 1
GSM3519207 C57_mpFC_ctr 2
GSM3519208 C57_mpFC_ctr 3
Relations
BioProject PRJNA510603

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124036_RAW.tar 99.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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