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Series GSE123986 Query DataSets for GSE123986
Status Public on Jul 31, 2019
Title Integrated miRNA and mRNA expression analysis uncovers drug targets in squamous cell carcinoma patients [mRNA]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Expression microarray analyses was used to analyze 35 laryngeal squamous cell carcinoma (LSCC) with reference sample (pool of 5 normal tissue ). A quality control filter was applied based on Feature Extraction flags (empty spaces replacing values)
Overall design Experiment condition, 35 LSCC and 5 normal laryngeal tissue samples obtained from total laryngectomies were laleled with Cy3 and a pool of 5 normal larynx tissue was labled with Cy3. Samples Cy3 and Cy5 were mixed and hybridized at slide glasses Agilent 8x60k platform.
Contributor(s) Lopez Lapa RM, Barros Filho MC
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Submission date Dec 17, 2018
Last update date Aug 03, 2019
Contact name Rainer Marco Lopez Lapa
Phone +5511982849724
Organization name UNESP
Department Neogene
Lab Neogene
Street address Av. Prof. Mário Rubens Guimarães Montenegro, s/n, s/n
City Botucatu
State/province SP
ZIP/Postal code 18618-687
Country Brazil
Platforms (1)
GPL14550 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
Samples (35)
GSM3518223 3626T tumor unmatched
GSM3518224 3627T tumor unmatched
GSM3518225 3644T tumor unmatched
This SubSeries is part of SuperSeries:
GSE124679 Integrated miRNA and mRNA expression analysis uncovers drug targets in squamous cell carcinoma patients
BioProject PRJNA510425

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123986_RAW.tar 746.1 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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