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GEO accession:
Series GSE122961
Query DataSets for GSE122961
Status
Public on Jul 01, 2019
Title
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution
Organisms
Saccharomyces cerevisiae
;
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31257032
Submission date
Nov 26, 2018
Last update date
Oct 01, 2019
Contact name
Miguel A. Garcia-Campos
E-mail(s)
garciacampos.bioinfo@gmail.com
Organization name
Weizmann Insitute of Science
Department
Molecular Genetics
Lab
Schwartz Lab
Street address
Herzl 234, Meyer Bldg., Room 1410
City
Rehovot
State/province
Center District
ZIP/Postal code
76100
Country
Israel
Platforms (3)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL19756
Illumina NextSeq 500 (Saccharomyces cerevisiae)
Samples (49)
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More...
GSM3489086
WT input replicate 1
GSM3489087
WT IP replicate 1
GSM3489088
WT input replicate 2
GSM3489089
WT IP replicate 2
GSM3489090
IME4-KO input replicate 1
GSM3489091
IME4-KO IP replicate 1
GSM3489092
IME4-KO input replicate 2
GSM3489093
IME4-KO IP replicate 2
GSM3489094
WT_sporulation_0
GSM3489095
WT_sporulation_1
GSM3489096
WT_sporulation_2
GSM3489097
WT_sporulation_3
GSM3489098
WT_sporulation_3.5
GSM3489099
WT_sporulation_4
GSM3489100
WT_sporulation_5
GSM3489101
WT_sporulation_6
GSM3489102
WT_sporulation_7
GSM3489103
WT_sporulation_8
GSM3489104
WT_spoControl_rep1
GSM3489105
WT_spoControl_rep2
GSM3489106
DEL_spoControl_rep1
GSM3489107
DEL_spoControl_rep2
GSM3489108
EBS METTL3 KO replicate 1
GSM3489109
EBS METTL3 KO replicate 2
GSM3489110
EBS METTL3 WT replicate 1
GSM3489111
EBS METTL3 WT replicate 2
GSM3489112
ESC METTL3 KO replicate 1
GSM3489113
ESC METTL3 KO replicate 2
GSM3489114
ESC METTL3 KO replicate 3
GSM3489115
ESC METTL3 WT replicate 1
GSM3489116
ESC METTL3 WT replicate 2
GSM3489117
ESC METTL3 WT replicate 3
GSM3723213
hESC FTO KO replicate 1
GSM3723214
hESC FTO KO replicate 2
GSM3723215
hESC FTO KO replicate 3
GSM3723216
hESC WT replicate 1
GSM3723217
hESC WT replicate 2
GSM3723218
hESC WT replicate 3
GSM3723219
HEK293T AlkBH5 OE replicate 1
GSM3723220
HEK293T AlkBH5 OE replicate 2
GSM3723221
HEK293T AlkBH5 OE replicate 3
GSM3723222
HEK293T Control OE replicate 1
GSM3723223
HEK293T Control OE replicate 2
GSM3723224
HEK293T Control OE replicate 3
GSM3723225
HEK293T FTO OE replicate 1
GSM3723226
HEK293T FTO OE replicate 2
GSM3723227
HEK293T FTO OE replicate 3
GSM3723228
HEK293T Cytosolic replicate 1
GSM3723229
HEK293T Cytosolic replicate 2
This SuperSeries is composed of the following SubSeries:
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More...
GSE122954
De novo detection of m6A modification in Saccharomyces cerevisiae at single nucleotide resolution
GSE122955
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [I]
GSE122956
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [II]
GSE129842
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III]
Relations
BioProject
PRJNA506999
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Format
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