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Series GSE122769 Query DataSets for GSE122769
Status Public on Nov 21, 2018
Title Engrafted parenchymal brain macrophages differ from microglia in transcriptome, chromatin landscape and response to challenge
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30523248
Submission date Nov 20, 2018
Last update date Mar 25, 2019
Contact name Steffen Jung
E-mail(s) s.jung@weizmann.ac.il
Phone 0097289342787
Organization name The Weizmann Institute of Science
Department Immunology and Regenerative Biology
Lab Steffen Jung
Street address Herzl
City REHOVOT
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (28)
GSM3484714 AS_BM_microglia_12h_LPS_1_CD451
GSM3484715 AS_BM_microglia_12h_LPS_1_CD452
GSM3484716 AS_BM_microglia_12h_LPS_2_CD451
This SuperSeries is composed of the following SubSeries:
GSE122766 Engrafted parenchymal brain macrophages differ from microglia in transcriptome, chromatin landscape and response to challenge (RNA-Seq)
GSE122768 Engrafted parenchymal brain macrophages differ from microglia in transcriptome, chromatin landscape and response to challenge (ATAC-Seq)
Relations
BioProject PRJNA506253

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122769_RAW.tar 1.3 Gb (http)(custom) TAR (of BIGWIG, TXT)
SRA Run SelectorHelp

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