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Series GSE121002 Query DataSets for GSE121002
Status Public on Jan 08, 2019
Title Single-cell gene expression of anti-viral WT and Thpok-deficient effector and memory T cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Single-cell gene expression of effector and memory CD4+ and CD8+ T cells from WT or Thppok-deficient animals was determined by sRNAseq after LCMV Armstrong infection
 
Overall design 7 and 30 days post-infection with LCMV Arm spleen T cells were sorted and gene expression was determined by scRNAseq
 
Contributor(s) Bosselut R, Ciucci T
Citation(s) 30638736
Submission date Oct 09, 2018
Last update date Jul 07, 2022
Contact name Thomas Ciucci
E-mail(s) thomasciucci@icloud.com
Organization name -
Street address -
City -
ZIP/Postal code -
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (7)
GSM3423794 TotalCD44_1
GSM3423795 TotalCD44_2
GSM3423796 d7_GP66
Relations
BioProject PRJNA495334
SRA SRP164943

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121002_RAW.tar 130.4 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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