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Series GSE120632 Query DataSets for GSE120632
Status Public on Sep 01, 2023
Title Regulation of CpG methylation by the Glucocorticoid Receptor in zebrafish
Organism Danio rerio
Experiment type Methylation profiling by high throughput sequencing
Summary The methylomes of whole adult zebrafish brains was compared in gr s357 mutants and wild type siblings
 
Overall design Differentially Methylated Regions were identified in adult zebrafish grs357 homozygous mutant versus wild type sibling brains using Whole Genome Bisulfite Sequencing. Homozygous mutant and wild type siblings were analysed in duplicate.
 
Contributor(s) Cunliffe VT, Eachus HL
Citation(s) 37525888
Submission date Sep 28, 2018
Last update date Mar 11, 2024
Contact name Vincent Trevor Cunliffe
E-mail(s) v.t.cunliffe@sheffield.ac.uk
Phone +44 114 222 2389
Organization name University of Sheffield
Department School of Biosciences
Lab Firth Court
Street address Western Bank
City Sheffield
State/province South Yorkshire
ZIP/Postal code S10 2TN
Country United Kingdom
 
Platforms (1)
GPL18413 Illumina HiSeq 2500 (Danio rerio)
Samples (4)
GSM3406668 GRWT2
GSM3406669 GRWT3
GSM3406670 GRMut2
Relations
BioProject PRJNA493812
SRA SRP162864

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120632_RAW.tar 466.1 Mb (http)(custom) TAR (of COV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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