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GEO accession:
Series GSE119375
Query DataSets for GSE119375
Status
Public on Sep 26, 2018
Title
Analysis of transcriptomes and open chromatin regions of sub-populations of human Tregs
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Expression profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
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Submission date
Sep 03, 2018
Last update date
Mar 27, 2019
Contact name
Mehdi Pirooznia
E-mail(s)
pirooznia@gmail.com
Phone
410-340-6052
Organization name
National Institutes of Health
Street address
12 SOUTH DR
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (3)
GPL6244
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL21290
Illumina HiSeq 3000 (Homo sapiens)
Samples (30)
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More...
GSM3373878
Donor1_naive Tregs [S02]
GSM3373879
Donor1_memory Tregs [S03]
GSM3373880
Donor1_CD161+ Tregs [S04]
GSM3373881
Donor2_naive Tregs [S05]
GSM3373882
Donor2_memory Tregs [S06]
GSM3373883
Donor2_CD161+ Tregs [S07]
GSM3373884
Donor3_naive Tregs [S08]
GSM3373885
Donor3_memory Tregs [S09]
GSM3373886
Donor3_CD161+ Tregs [S10]
GSM3373887
Healthy donor 1 [BA_1]
GSM3373888
Healthy donor 2 [BA_2]
GSM3373889
Healthy donor 3 [BA_3]
GSM3373890
Donor1_naive Tregs_fresh
GSM3373891
Donor1_memory Tregs_fresh
GSM3373892
Donor1_CD161+ Tregs_fresh
GSM3373893
Donor2_naive Tregs_fresh
GSM3373894
Donor2_memory Tregs_fresh
GSM3373895
Donor2_CD161+ Tregs_fresh
GSM3373896
Donor3_naive Tregs_fresh
GSM3373897
Donor3_memory Tregs_fresh
GSM3373898
Donor3_CD161+ Tregs_fresh
GSM3373899
Donor1_naive Tregs_activated
GSM3373900
Donor1_memory Tregs_activated
GSM3373901
Donor1_CD161+ Tregs_activated
GSM3373902
Donor2_naive Tregs_activated
GSM3373903
Donor2_memory Tregs_activated
GSM3373904
Donor2_CD161+ Tregs_activated
GSM3373905
Donor3_naive Tregs_activated
GSM3373906
Donor3_memory Tregs_activated
GSM3373907
Donor3_CD161+ Tregs_activated
This SuperSeries is composed of the following SubSeries:
GSE119372
ATAC-seq data from naïve Tregs, memory Tregs and CD161+ Tregs
GSE119373
single cell RNA-sequencing data from CD4+CD25+ human cells
GSE119374
Transcriptome analysis of naïve Tregs, memory Tregs and CD161+ Tregs
Relations
BioProject
PRJNA489002
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE119375_RAW.tar
77.9 Mb
(http)
(custom)
TAR (of CEL, TXT)
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