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| Status |
Public on Aug 27, 2018 |
| Title |
affy_infection_medicago - Comparison of plant responses upon P. palmivora infection in wild type (A17) line and in the api mutant |
| Platform organisms |
Sinorhizobium meliloti; Medicago sativa; Medicago truncatula |
| Sample organism |
Medicago truncatula |
| Experiment type |
Expression profiling by array
|
| Summary |
affy_infection_medicago - api mutant has been shown to be more resistant to P. palmivora than the A17 wild type (WT) line. In this study, we want to compare both WT and mutant plant responses to the pathogen as well as their respective control transcriptomes in order to identify api-dependent gene networks. Following germination, A17 or api plants grown in vitro on Agar medium were inoculated (or not = controls) with a P. palmivora zoospores (10^5/ml) and harvested 16 hours after inoculation. Three independent repeats were performed.
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| Overall design |
12 arrays - Medicago; normal vs. disease comparison, normal vs. ems mutant comparison, time course.
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| Contributor(s) |
Rey T, Schornack S |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 26, 2018 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Thomas R Rey |
| E-mail(s) |
thomas-rey@hotmail.fr
|
| Phone |
+33679125078
|
| Organization name |
DE SANGOSSE
|
| Street address |
24 chemin de borde rouge, BP42617
|
| City |
CASTANET TOLOSAN |
| ZIP/Postal code |
31240326 |
| Country |
France |
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| Platforms (1) |
| GPL4652 |
[Medicago] Affymetrix Medicago Genome Array |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA487946 |
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