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Series GSE118709 Query DataSets for GSE118709
Status Public on May 15, 2019
Title Methylome, transcriptome, RIP-seq and small RNA-seq of the Arabidopsis mRNA export mutant aly1 and associated controls
Organism Arabidopsis thaliana
Experiment type Methylation profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30814259
Submission date Aug 17, 2018
Last update date May 15, 2019
Contact name R. Keith Slotkin
E-mail(s) kslotkin@danforthcenter.org
Organization name Donald Danforth Plant Science Center
Street address 975 North Warson Road
City St. Louis
State/province Missouri
ZIP/Postal code 63132
Country USA
 
Platforms (3)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
GPL21785 Illumina HiSeq 4000 (Arabidopsis thaliana)
Samples (38)
GSM3336747 wt Col - rep1 [MethylC-seq]
GSM3336748 cmt2 [MethylC-seq]
GSM3336749 pol V [MethylC-seq]
This SuperSeries is composed of the following SubSeries:
GSE118695 Methylome of the Arabidopsis mRNA export mutant aly1 and associated controls
GSE118705 Small RNA-seq of the Arabidopsis mRNA export mutant aly1 and associated controls
GSE118708 Transcriptome of the Arabidopsis mRNA export mutant aly1 and associated controls
Relations
BioProject PRJNA486518

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118709_RAW.tar 1.9 Gb (http)(custom) TAR (of TSV, TXT)
SRA Run SelectorHelp

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