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Series GSE11774 Query DataSets for GSE11774
Status Public on Oct 01, 2008
Title Expression data from cold treated wheat cultivars
Organism Triticum aestivum
Experiment type Expression profiling by array
Summary Different wheat cultivars may be classified as either winter or spring varieties depending on whether they require exposure to an extended period of cold in order to become competent to flower. Using a growth regime that mimics the conditions that occur during a typical winter in Britain, we wished to survey the genes that are involved in phase transition as well as those involved in cold-acclimation.

Keywords: Time course
 
Overall design We wished to study the profiles of expression of genes involved in both phase transition (vegetative to reproductive growth transition) and cold-acclimation. To that end we we exposed plants to a gradual, stepped decline in both temperature and light. We sampled plants at three time points (3 weeks post-germination, 5 weeks post germination and 9 weeks post germination). We took samples from two separate tissues (crown and leaf) to se whether responses were different. We used two biological reps for each time point and tissue. Control plants were exposed to a delined in day-length and light intensity, but not in temperature.
 
Contributor(s) Winfield MO, Lui C, Wilson ID, Coghill JA, Edwards KJ
Citation(s) 19432994
Submission date Jun 12, 2008
Last update date Dec 04, 2018
Contact name Mark Owen Winfield
E-mail(s) Mark.Winfield@bristol.ac.uk
Phone 07753191981
Organization name Bristol University
Department Biological Sciences
Lab OB120
Street address Woodland Road
City Bristol
ZIP/Postal code BS8 1UG
Country United Kingdom
 
Platforms (1)
GPL3802 [wheat] Affymetrix Wheat Genome Array
Samples (42)
GSM298053 Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1
GSM298054 Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2
GSM298055 Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1
Relations
BioProject PRJNA105959

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE11774_RAW.tar 204.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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