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Series GSE117656 Query DataSets for GSE117656
Status Public on Dec 31, 2018
Title Evolution of gene expression levels in Anopheles male reproductive organs
Organisms Anopheles gambiae; Anopheles arabiensis; Anopheles merus; Anopheles quadriannulatus; Anopheles coluzzii
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression was determined for Male accessory gland and testes in different members of the Anopheles gambiae complex, including An. gambiae (Savannah, MRA-762), An. coluzzii (Mopti) [2], An. arabiensis [3], An. merus [4] and An. quadriannalatus [5. All the mosquito stocks were obtained from the Malaria Research and Reference Reagent Resource Center (MR4) in Atlanta ( References: 1. MR4 wild stocks information. Access Jenuary 2018. (Kisumu) 2. MR4 wild stocks information. Access Jenuary 2018. (Mopti) 3. MR4 wild stocks information. Access Jenuary 2018. (arabiensis) 4. MR4 wild stocks information. Access Jenuary 2018. (merus) 5. MR4 wild stocks information. Access Jenuary 2018. (quadriannulatus)
Overall design MAGs and Testes mRNA profiles of Anopheles species were generated by deep sequencing, in triplicate, using Illumina HiSeq 1500
Contributor(s) Dottorini T, Emes RD
Citation(s) 30623175
Submission date Jul 25, 2018
Last update date Jan 15, 2019
Contact name Richard D Emes
Phone 1159516583
Organization name University of Nottingham
Department School of Veterinary Medicine and Sciences.
Street address School of Veterinary Medicine and Science
City Nottingham
State/province Nottinghamshire
ZIP/Postal code LE12 5RD
Country United Kingdom
Platforms (5)
GPL25376 Illumina HiSeq 1500 (Anopheles arabiensis)
GPL25377 Illumina HiSeq 1500 (Anopheles gambiae)
GPL25378 Illumina HiSeq 1500 (Anopheles merus)
Samples (30)
GSM3305690 DM.RNASeq Rep 1
GSM3305691 DM.RNASeq Rep 2
GSM3305692 DM.RNASeq Rep 3
BioProject PRJNA482838
SRA SRP155215

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117656_RAW.tar 2.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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