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| Status |
Public on Oct 23, 2018 |
| Title |
SMAD2 binding regions in breast cancer cell line and RNA-seq transcriptome analyses in T47D |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
30343527 |
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| Submission date |
Jul 23, 2018 |
| Last update date |
Mar 01, 2019 |
| Contact name |
Daizo Koinuma |
| E-mail(s) |
d-koinuma@umin.ac.jp
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| Organization name |
University of Tokyo
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| Department |
Pathology
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| Street address |
Hongo 7-3-1, Bunkyo-ku
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| City |
Tokyo |
| ZIP/Postal code |
113-0033 |
| Country |
Japan |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (15)
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| GSM3301947 |
T47D, SMAD2 binding region after ActA stimulation, rep1 |
| GSM3301948 |
T47D, SMAD2 binding region after ActA stimulation and Palbo treatment, rep1 |
| GSM3301949 |
T47D, SMAD2 binding region after ActA stimulation, rep2 |
| GSM3301950 |
T47D, SMAD2 binding region after ActA stimulation and Palbo treatment, rep2 |
| GSM3301951 |
T47D, input |
| GSM3301952 |
Hs578T, SMAD2 binding region after ActA stimulation rep1 |
| GSM3301953 |
Hs578T, SMAD2 binding region after ActA stimulation and Palbo treatment rep1 |
| GSM3301954 |
Hs578T, SMAD2 binding region after ActA stimulation rep2 |
| GSM3301955 |
Hs578T, SMAD2 binding region after ActA stimulation and Palbo treatment rep2 |
| GSM3301956 |
Hs578T, input_ActA |
| GSM3301957 |
Hs578T, input_ActA_Palbo |
| GSM3301958 |
T47D control |
| GSM3301959 |
T47D Palbo 48h |
| GSM3301960 |
T47D ActA 24h |
| GSM3301961 |
T47D ActA 24h and Palbo 48h |
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| This SuperSeries is composed of the following SubSeries: |
| GSE117495 |
SMAD2 binding regions in estrogen receptor-positive breast cancer cell line, T47D |
| GSE117496 |
SMAD2 binding regions in triple negative breast cancer cell line, Hs578T |
| GSE117497 |
RNA-seq transcriptome analyses in T47D cells treated with ActA and Palbociclib. |
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| Relations |
| BioProject |
PRJNA482337 |
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