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Status |
Public on Oct 23, 2018 |
Title |
SMAD2 binding regions in breast cancer cell line and RNA-seq transcriptome analyses in T47D |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
30343527 |
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Submission date |
Jul 23, 2018 |
Last update date |
Mar 01, 2019 |
Contact name |
Daizo Koinuma |
E-mail(s) |
d-koinuma@umin.ac.jp
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Organization name |
University of Tokyo
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Department |
Pathology
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Street address |
Hongo 7-3-1, Bunkyo-ku
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City |
Tokyo |
ZIP/Postal code |
113-0033 |
Country |
Japan |
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Platforms (1) |
GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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Samples (15)
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GSM3301947 |
T47D, SMAD2 binding region after ActA stimulation, rep1 |
GSM3301948 |
T47D, SMAD2 binding region after ActA stimulation and Palbo treatment, rep1 |
GSM3301949 |
T47D, SMAD2 binding region after ActA stimulation, rep2 |
GSM3301950 |
T47D, SMAD2 binding region after ActA stimulation and Palbo treatment, rep2 |
GSM3301951 |
T47D, input |
GSM3301952 |
Hs578T, SMAD2 binding region after ActA stimulation rep1 |
GSM3301953 |
Hs578T, SMAD2 binding region after ActA stimulation and Palbo treatment rep1 |
GSM3301954 |
Hs578T, SMAD2 binding region after ActA stimulation rep2 |
GSM3301955 |
Hs578T, SMAD2 binding region after ActA stimulation and Palbo treatment rep2 |
GSM3301956 |
Hs578T, input_ActA |
GSM3301957 |
Hs578T, input_ActA_Palbo |
GSM3301958 |
T47D control |
GSM3301959 |
T47D Palbo 48h |
GSM3301960 |
T47D ActA 24h |
GSM3301961 |
T47D ActA 24h and Palbo 48h |
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This SuperSeries is composed of the following SubSeries: |
GSE117495 |
SMAD2 binding regions in estrogen receptor-positive breast cancer cell line, T47D |
GSE117496 |
SMAD2 binding regions in triple negative breast cancer cell line, Hs578T |
GSE117497 |
RNA-seq transcriptome analyses in T47D cells treated with ActA and Palbociclib. |
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Relations |
BioProject |
PRJNA482337 |
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