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GEO accession:
Series GSE116919
Query DataSets for GSE116919
Status
Public on Jul 09, 2019
Title
Response of triple negative breast cancer to BAZ2A/B inhibition and BET bromodomain inhibition alone and in combination
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31000582
Submission date
Jul 11, 2018
Last update date
Oct 08, 2019
Contact name
Bradley E Bernstein
E-mail(s)
Bradley_bernstein@dfci.harvard.edu
Organization name
Dana Farber Cancer Institute
Department
Cancer Biology
Lab
Bradley Bernstein
Street address
450 Brookline Ave
City
Boston
State/province
Massachusetts
ZIP/Postal code
02215
Country
USA
Platforms (1)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
Samples (48)
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GSM3263316
MDAMB231_BRD2_DMSO_48h
GSM3263317
MDAMB231_BRD2_10uMGSK2801_48h
GSM3263318
MDAMB231_BRD2_100nMJQ1_48h
GSM3263319
MDAMB231_BRD2_100nMJQ1_10uMGSK2801_48h
GSM3263320
MDAMB231_BRD4_DMSO_48h
GSM3263321
MDAMB231_BRD4_10uMGSK2801_48h
GSM3263322
MDAMB231_BRD4_100nMJQ1_48h
GSM3263323
MDAMB231_BRD4_100nMJQ1_10uMGSK2801_48h
GSM3263324
MDAMB231_input_DMSO_48h
GSM3263325
MDAMB231_BRD2_NTsiRNA_48h
GSM3263326
MDAMB231_BRD2_BAZ2AsiRNA_48h
GSM3263327
MDAMB231_BRD2_BAZ2BsiRNA_48h
GSM3263328
MDAMB231_BRD2_NTsiRNA_100nMJQ1__48h
GSM3263329
MDAMB231_BRD2_BAZ2AsiRNA_100nMJQ1_48h
GSM3263330
MDAMB231_BRD2_BAZ2BsiRNA_100nMJQ1_48h
GSM3263331
SUM159_BRD2_DMSO_48h
GSM3263332
SUM159_BRD2_10uMGSK2801_48h
GSM3263333
SUM159_BRD2_100nMJQ1_48h
GSM3263334
SUM159_BRD2_100nMJQ1_10uMGSK2801_48h
GSM3263335
HCC1806_BRD2_NTsiRNA_48h
GSM3263336
HCC1806_BRD2_BAZ2BsiRNA_48h
GSM3263337
HCC1806_BRD2_NTsiRNA_500nMJQ1_48h
GSM3263338
HCC1806_BRD2_BAZ2B_500nMJQ1_48h
GSM3263339
MDAMB231_BRD2_DMSO_48h_rDNA
GSM3263340
MDAMB231_BRD2_10uMGSK2801_48h_rDNA
GSM3263341
MDAMB231_BRD2_100nMJQ1_48h_rDNA
GSM3263342
MDAMB231_BRD2_100nMJQ1_10uMGSK2801_48h_rDNA
GSM3263343
MDAMB231_BRD4_DMSO_48h_rDNA
GSM3263344
MDAMB231_BRD4_10uMGSK2801_48h_rDNA
GSM3263345
MDAMB231_BRD4_100nMJQ1_48h_rDNA
GSM3263346
MDAMB231_BRD4_100nMJQ1_10uMGSK2801_48h_rDNA
GSM3263347
MDAMB231_input_DMSO_48h_rDNA
GSM3263348
MDAMB231_BRD9_DMSO_48h
GSM3263349
MDAMB231_BRD9_10uMGSK2801_48h
GSM3263350
MDAMB231_BRD9_100nMJQ1_48h
GSM3263351
MDAMB231_BRD9_100nMJQ1_10uMGSK2801_48h
GSM3263568
SUM159_DMSO_72hr
GSM3263569
SUM159_300nM_JQ1_72hr
GSM3263570
SUM159_10uM_GSK2801_72hr
GSM3263571
SUM159_300nM_JQ1_10uM_GSK2801_72hr
GSM3263572
MDAMB231_DMSO_72hr
GSM3263573
MDAMB231_100nM_JQ1_72hr
GSM3263574
MDAMB231_10uM_GSK2801_72hr
GSM3263575
MDAMB231_100nM_JQ1_10uM_GSK2801_72hr
GSM3263576
HCC1806_DMSO_72hr
GSM3263577
HCC1806_500nM_JQ1_72hr
GSM3263578
HCC1806_10uM_GSK2801_72hr
GSM3263579
HCC1806_500nM_JQ1_10uM_GSK2801_72hr
This SuperSeries is composed of the following SubSeries:
GSE116879
Response of triple negative breast cancer to BAZ2A/B inhibition and BET bromodomain inhibition alone and in combination (ChIPseq)
GSE116907
Response of triple negative breast cancer to BAZ2A/B inhibition and BET bromodomain inhibition alone and in combination (RNAseq)
Relations
BioProject
PRJNA480608
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE116919_RAW.tar
44.8 Mb
(http)
(custom)
TAR (of BED, NARROWPEAK, TXT)
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