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Series GSE116798 Query DataSets for GSE116798
Status Public on Feb 06, 2020
Title Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 09, 2018
Last update date Feb 08, 2020
Contact name Shinichiro Chuma
E-mail(s) chuma.shinichiro.3x@kyoto-u.ac.jp
Phone +81-75-751-3821
Organization name Kyoto university
Department Institute for Frontier Life and Medical Sciences
Lab Laboratory of Developmental Epigenome
Street address 53 Kawahara-cho, Shogoin, Sakyo-ku
City Kyoto
State/province Kyoto
ZIP/Postal code 606-8507
Country Japan
 
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (23)
GSM3261829 GS control RNA
GSM3261830 GS RA24h RNA
GSM3261831 GS RA72h RNA
This SuperSeries is composed of the following SubSeries:
GSE116779 Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [RNA-seq]
GSE116784 Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq]
GSE139677 Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq II]
Relations
BioProject PRJNA480263

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116798_RAW.tar 4.7 Gb (http)(custom) TAR (of BEDGRAPH, FPKM_TRACKING)
SRA Run SelectorHelp

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