|
| Status |
Public on Sep 23, 2019 |
| Title |
RNA-seq analysis of LSK from Oga(Vav-Cre) mice compared to wildtype |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In order to define HSC dysfunction in Oga mutant mice, we examined transcriptional deregulation in LSK cells from Oga(Vav-cre) mice in comparison to wildtype and found 41 downregulated and 12 upregulated genes
|
| |
|
| Overall design |
RNA-Seq of LSK cells from 3 Oga(Vav-cre) female mice and 3 wildtype female mice
|
| |
|
| Contributor(s) |
Abramowitz LK, Harly C, Bhandoola A, Hanover JA |
| Citation(s) |
31467334 |
| |
| Submission date |
Jul 03, 2018 |
| Last update date |
Sep 23, 2019 |
| Contact name |
WeiPing Chen |
| E-mail(s) |
weipingChen@niddk.nih.gov
|
| Phone |
301-496-0175
|
| Organization name |
NIDDK/NIH
|
| Department |
GCL
|
| Lab |
Genomics Core Lab
|
| Street address |
Bldg 8, Room 1A11, NIDDK/NIH
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA479527 |
| SRA |
SRP151955 |
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