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| Status |
Public on Dec 07, 2010 |
| Title |
The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation: ChIP-seq data |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
These ChIP-seq data files are part of a study where a comparison was made between the change in transcription and H3K4 mono-, di-, and tri-methylation levels in the Arabidopsis thaliana genome when plants are subjected to water deficit stress.
Keywords: stress response, histone modification
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| Overall design |
Arabidopsis thaliana DNA histone modifications were immonuprecipitated from control (watered) and treatment (water-deficit) samples for Illumina 1G Solexa sequencing.
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| Contributor(s) |
van Dijk K, Riethoven JM, Yang J, Laczko P, Chen H, Xia Y, Ladunga I, Fromm ME |
| Citation(s) |
21050490 |
| |
| Submission date |
Jun 03, 2008 |
| Last update date |
Aug 10, 2016 |
| Contact name |
Jean-Jack M. Riethoven |
| E-mail(s) |
jeanjack@unl.edu
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| Organization name |
University of Nebraska-Lincoln
|
| Department |
Beadle Center for Biotechnology
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| Lab |
Bioinformatics Core Research Facility
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| Street address |
1901 Vine Street
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| City |
Lincoln |
| State/province |
NE |
| ZIP/Postal code |
68588-0665 |
| Country |
USA |
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| Platforms (1) |
| GPL9062 |
Illumina Genome Analyzer (Arabidopsis thaliana) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE11658 |
The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation |
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| Relations |
| BioProject |
PRJNA109153 |
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