|
| Status |
Public on Jul 26, 2019 |
| Title |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31350899, 34168324 |
| |
| Submission date |
Jun 26, 2018 |
| Last update date |
Aug 17, 2021 |
| Contact name |
Filippo M. Cernilogar |
| E-mail(s) |
filippo.cernilogar@med.uni-muenchen.de
|
| Organization name |
LMU Munich
|
| Department |
Biomedical Center
|
| Street address |
Grosshaderner Strasse 9
|
| City |
Planegg-Martinsried |
| ZIP/Postal code |
82152 |
| Country |
Germany |
| |
|
| Platforms (2) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
|
| Samples (94)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE116255 |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 [ATAC-seq] |
| GSE116257 |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 [ChIP-seq Histone-Modifications] |
| GSE116258 |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 [ChIP-seq Transcription Factors] |
| GSE116259 |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 [RNA-seq] |
| GSE116260 |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 [RNA-seq low input] |
| GSE116261 |
Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2 [MeDIP-seq] |
|
| Relations |
| BioProject |
PRJNA477900 |
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