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Series GSE116190 Query DataSets for GSE116190
Status Public on Sep 01, 2018
Title Identification of EGR1 binding sites in melanoma cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the genome wide identification of EGR1 binding sites in the A375 melanoma cell line.
 
Overall design ChIP-seq to identify EGR1 binding sites in the A375 melanoma cell line.
 
Contributor(s) Schmidt K, Novina C
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 23, 2018
Last update date Mar 26, 2019
Contact name Carl Novina
E-mail(s) carl_novina@dfci.harvard.edu
Organization name Dana-Farber Cancer Institute
Department Cancer Immunology
Lab Carl Novina
Street address 450 Brookline Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (2)
GSM3212794 Input DNA_for_EGR
GSM3212795 A375 EGR1 ChIP
This SubSeries is part of SuperSeries:
GSE116191 Global identification of Androgen Receptor and EGR1 binding sites in melanoma reveals enriched co-binding at genes regulated by the lncRNA SLNCR
Relations
BioProject PRJNA477660
SRA SRP151197

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116190_RAW.tar 306.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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