|
| Status |
Public on Sep 01, 2018 |
| Title |
Identification of Androgen Receptor binding sites in hormone-depleted melanoma cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We report the genome wide identification of AR binding sites in hormone-deprived A375 melanoma cell line, with either endogenous levels of the lncRNA SLNCR, or a vector expressing SLNCR1.
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| |
|
| Overall design |
Comparison of AR binding sites in hormone-deprived A375 melanoma cells transfected with either an empty- or SLNCR1 lncRNA expressing vector.
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|
| Contributor(s) |
Schmidt K, Novina C |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 23, 2018 |
| Last update date |
Mar 26, 2019 |
| Contact name |
Carl Novina |
| E-mail(s) |
carl_novina@dfci.harvard.edu
|
| Organization name |
Dana-Farber Cancer Institute
|
| Department |
Cancer Immunology
|
| Lab |
Carl Novina
|
| Street address |
450 Brookline Ave
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE116191 |
Global identification of Androgen Receptor and EGR1 binding sites in melanoma reveals enriched co-binding at genes regulated by the lncRNA SLNCR |
|
| Relations |
| BioProject |
PRJNA477662 |
| SRA |
SRP151198 |
