|
| Status |
Public on Feb 15, 2020 |
| Title |
Phosphorylated Lamin A/C in the nuclear interior binds active enhancers associated with abnormal transcription in progeria |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
32208162 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R33 AG054770 |
Mechanisms in Lamin A function in gene regulation |
UNIVERSITY OF CHICAGO |
Kohta Ikegami |
| R21 AG054770 |
Mechanisms in Lamin A function in gene regulation |
UNIVERSITY OF CHICAGO |
Kohta Ikegami |
|
| Submission date |
Apr 18, 2018 |
| Last update date |
Apr 13, 2020 |
| Contact name |
Kohta Ikegami |
| E-mail(s) |
ikgmk@uchicago.edu
|
| Phone |
(773) 834-4260
|
| Organization name |
University of Chicago
|
| Department |
Pediatrics
|
| Lab |
Ikegami Lab
|
| Street address |
900 E. 57th Street, KCBD 5240
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60637 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (83)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE113291 |
ChIP-seq reported in "Phosphorylated Lamin A/C in the nuclear interior binds active enhancers associated with abnormal transcription in progeria" |
| GSE113343 |
RNA-seq reported in "Phosphorylated Lamin A/C in the nuclear interior binds active enhancers associated with abnormal transcription in progeria" |
| GSE113350 |
GRO-seq reported in "Phosphorylated Lamin A/C in the nuclear interior binds active enhancers associated with abnormal transcription in progeria" |
| GSE113352 |
ATAC-seq reported in "Phosphorylated Lamin A/C in the nuclear interior binds active enhancers associated with abnormal transcription in progeria" |
|
| Relations |
| BioProject |
PRJNA450863 |
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