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Series GSE11222 Query DataSets for GSE11222
Status Public on Apr 23, 2008
Title Placental and decidual timecourse samples normalized and modeled with an undissected e17 sample
Organism Mus musculus
Experiment type Expression profiling by array
Summary We used full genome microarrays to profile the full lifetime of the mouse placenta from embryonic day 8.5 (e8.5), at the time of chorioallantoic fusion, until postnatal day 0 (P0). For these samples, at each stage the fetal placenta and maternal decidual tissues were dissected and profiled separately (See series 1).
For this experiment (Series 2), placental and decidual timecourse samples were normalized and modeled with two undissected (including placental and decidual tissue) e17 placentas to allow for scaling of values for comparison to the undissected placenta samples used in the publicly available mouse GeneAtlas dataset
Keywords: time course
Overall design Mouse placentas were obtained from timed pregnant female mice at each timepoint, and fetal tissues were used to confirm embryo staging. For all dissected samples, fetal placenta and maternal decidual tissues were dissected and pooled separately for each litter prior to RNA extraction and hybridization on Affymetrix microarrays.
Contributor(s) Knox K, Baker JC
Citation(s) 18340042
Submission date Apr 21, 2008
Last update date Feb 11, 2019
Contact name Kirstin Knox
Organization name Stanford Univeristy
Department Genetics
Lab Julie Baker
Street address 300 Pasteur Dr.
City Stanford
State/province CA
ZIP/Postal code 94304
Country USA
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (42)
GSM282813 Placenta e8.5, biological rep3 (Series 2)
GSM282814 Placenta e9.0, biological rep1 (Series 2)
GSM282815 Placenta e9.0, biological rep2 (Series 2)
This SubSeries is part of SuperSeries:
GSE11224 Expression data from developing mouse placenta
BioProject PRJNA109183

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE11222_RAW.tar 156.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Raw data provided as supplementary file

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