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Series GSE111664 Query DataSets for GSE111664
Status Public on Oct 24, 2018
Title Drop-seq analysis of bleomycin-treated and control mouse lung single-cell suspensions
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Cell suspensions were prepared from mouse lungs dissociated at baseline or 14 days after intratracheal bleomycin injury, and single cell mRNA-seq libraries were generated with Drop-seq.
Overall design Drop-seq was performed on single cell suspensions from lungs of 3 bleomycin-treated and 6 control mouse mice.
Contributor(s) Liu L, Bhattacharya M, Agnieszka LP, Aran D
Citation(s) 30643263
Submission date Mar 11, 2018
Last update date Mar 21, 2019
Contact name Leqian Liu
Organization name UCSF
Department BTS
Lab Abate
Street address 1700 4th street
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
Platforms (2)
GPL16417 Illumina MiSeq (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (10)
GSM3036808 Control_1_1
GSM3036809 Control_1_2
GSM3036810 Control_2
BioProject PRJNA437767
SRA SRP134737

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111664_RAW.tar 20.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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