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GEO accession:
Series GSE111463
Query DataSets for GSE111463
Status
Public on Apr 05, 2018
Title
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29622725
Submission date
Mar 06, 2018
Last update date
Jul 25, 2021
Contact name
Matthias Muhar
E-mail(s)
matthias.muhar@imp.ac.at
Organization name
Research Institute for Molecular Pathology
Street address
Campus-Vienna-Biocenter 1
City
Vienna
State/province
-
ZIP/Postal code
1030
Country
Austria
Platforms (2)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL18460
Illumina HiSeq 1500 (Homo sapiens)
Samples (137)
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More...
GSM2691848
K562_DMSO_exp-1
GSM2691849
K562_flavopiridol_exp-1
GSM2691850
K562_DMSO_exp-2
GSM2691851
K562_mk2206_exp-2
GSM2691852
K562_trametinib_exp-2
GSM2691853
K562_mk2206+trametinib_exp-2
GSM2691854
K562_nilotinib_exp-2
GSM2691855
K562_AID-BRD4_clone-2_DMSO_rep-1
GSM2691856
K562_AID-BRD4_clone-2_DMSO_rep-2
GSM2691857
K562_AID-BRD4_clone-2_DMSO_rep-3
GSM2691858
K562_AID-BRD4_clone-2_IAA_rep-1
GSM2691859
K562_AID-BRD4_clone-2_IAA_rep-2
GSM2691860
K562_AID-BRD4_clone-2_IAA_rep-3
GSM2691861
K562_DMSO_rep-1_exp-3
GSM2691862
K562_DMSO_rep-2_exp-3
GSM2691863
K562_DMSO_rep-3_exp-3
GSM2691864
K562_JQ1_rep-1_exp-3
GSM2691865
K562_JQ1_rep-2_exp-3
GSM2691866
K562_JQ1_rep-3_exp-3
GSM2691867
MV4-11_DMSO_rep-1
GSM2691868
MV4-11_DMSO_rep-2
GSM2691869
MV4-11_DMSO_rep-3
GSM2691870
MV4-11_JQ1_rep-1
GSM2691871
MV4-11_JQ1_rep-2
GSM2691872
MV4-11_JQ1_rep-3
GSM2691873
MOLM-13_DMSO_rep-1_exp-1
GSM2691874
MOLM-13_DMSO_rep-2_exp-1
GSM2691875
MOLM-13_DMSO_rep-3_exp-1
GSM2691876
MOLM-13_JQ1_rep-1_exp-1
GSM2691877
MOLM-13_JQ1_rep-2_exp-1
GSM2691878
MOLM-13_JQ1_rep-3_exp-1
GSM2691879
MOLM-13_unlabeled_rep-1
GSM2691880
MOLM-13_unlabeled_rep-2
GSM2691881
MOLM-13_unlabeled_rep-3
GSM2691882
MOLM-13_DMSO_rep-1_exp-2
GSM2691883
MOLM-13_DMSO_rep-2_exp-2
GSM2691884
MOLM-13_DMSO_rep-3_exp-2
GSM2691885
MOLM-13_JQ1_rep-1_exp-2
GSM2691886
MOLM-13_JQ1_rep-2_exp-2
GSM2691887
MOLM-13_JQ1_rep-3_exp-2
GSM2691888
MOLM-13_6nM_NVP-2_rep-1_exp-2
GSM2691889
MOLM-13_6nM_NVP-2_rep-2_exp-2
GSM2691890
MOLM-13_6nM_NVP-2_rep-3_exp-2
GSM2691891
MOLM-13_60nM_NVP-2_rep-1_exp-2
GSM2691892
MOLM-13_60nM_NVP-2_rep-2_exp-2
GSM2691893
MOLM-13_JQ1+6nM_NVP-2_rep-1_exp-2
GSM2691894
MOLM-13_JQ1+6nM_NVP-2_rep-2_exp-2
GSM2691895
MOLM-13_JQ1+6nM_NVP-2_rep-3_exp-2
GSM2691896
OCI/AML-3_DMSO_rep-1
GSM2691897
OCI/AML-3_DMSO_rep-2
GSM2691898
OCI/AML-3_JQ1_rep-1
GSM2691899
OCI/AML-3_JQ1_rep-2
GSM2691900
OCI/AML-3_JQ1_rep-3
GSM2691901
OCI/AML-3_6nM_NVP-2_rep-1
GSM2691902
OCI/AML-3_6nM_NVP-2_rep-2
GSM2691903
OCI/AML-3_6nM_NVP-2_rep-3
GSM2691904
OCI/AML-3_60nM_NVP-2_rep-1
GSM2691905
OCI/AML-3_60nM_NVP-2_rep-2
GSM2691906
OCI/AML-3_60nM_NVP-2_rep-3
GSM2691907
OCI/AML-3_JQ1+6nM_NVP-2_rep-1
GSM2691908
OCI/AML-3_JQ1+6nM_NVP-2_rep-2
GSM2691909
OCI/AML-3_JQ1+6nM_NVP-2_rep-3
GSM2691910
K562_MYC-AID_DMSO_rep-1
GSM2691911
K562_MYC-AID_DMSO_rep-2
GSM2691912
K562_MYC-AID_DMSO_rep-3
GSM2691913
K562_MYC-AID_IAA_rep-1
GSM2691914
K562_MYC-AID_IAA_rep-2
GSM2691915
K562_MYC-AID_IAA_rep-3
GSM2691916
HCT116_MYC-AID_DMSO_rep-1
GSM2691917
HCT116_MYC-AID_DMSO_rep-2
GSM2691918
HCT116_MYC-AID_DMSO_rep-3
GSM2691919
HCT116_MYC-AID_IAA_rep-1
GSM2691920
HCT116_MYC-AID_IAA_rep-2
GSM2691921
HCT116_MYC-AID_IAA_rep-3
GSM3031403
K562_SOP-ctrl_DMSO-rep-1
GSM3031404
K562_SOP-ctrl_DMSO-rep-2
GSM3031405
K562_SOP-ctrl_DMSO-rep-3
GSM3031406
K562_SOP-ctrl_IAA-rep-1
GSM3031407
K562_SOP-ctrl_IAA-rep-2
GSM3031408
K562_SOP-ctrl_IAA-rep-3
GSM3031409
K562_AID-BRD4_DMSO_rep-1
GSM3031410
K562_AID-BRD4_DMSO_rep-2
GSM3031411
K562_AID-BRD4_DMSO_rep-3
GSM3031412
K562_AID-BRD4_IAA_rep-1
GSM3031413
K562_AID-BRD4_IAA_rep-2
GSM3031414
K562_AID-BRD4_IAA_rep-3
GSM3031415
MV4-11_DMSO_rep-1_exp-2
GSM3031416
MV4-11_DMSO_rep-2_exp-2
GSM3031417
MV4-11_DMSO_rep-3_exp-2
GSM3031418
MV4-11_1uM_JQ1_rep-1_exp-2
GSM3031419
MV4-11_1uM_JQ1_rep-2_exp-2
GSM3031420
MV4-11_1uM_JQ1_rep-3_exp-2
GSM3031421
MV4-11_5uM_JQ1_rep-1_exp-2
GSM3031422
MV4-11_5uM_JQ1_rep-2_exp-2
GSM3031423
MV4-11_5uM_JQ1_rep-3_exp-2
GSM3031424
K562_DMSO_rep-1_exp-4
GSM3031425
K562_DMSO_rep-2_exp-4
GSM3031426
K562_DMSO_rep-3_exp-4
GSM3031427
K562_1uM_JQ1_rep-1_exp-4
GSM3031428
K562_1uM_JQ1_rep-2_exp-4
GSM3031429
K562_1uM_JQ1_rep-3_exp-4
GSM3031430
K562_5uM_JQ1_rep-1_exp-4
GSM3031431
K562_5uM_JQ1_rep-2_exp-4
GSM3031432
K562_5uM_JQ1_rep-3_exp-4
GSM3031441
K562_wt_bulk
GSM3031442
K562_wt_clone-1
GSM3031443
K562_wt_clone-2
GSM3031444
K562_wt_clone-3
GSM3031445
K562_wt_clone-4
GSM3031446
K562_wt_clone-5
GSM3031447
K562_wt_clone-6
GSM3031448
K562_wt_clone-7
GSM3031449
K562_wt_clone-8
GSM3031450
K562_wt_clone-9
GSM3031451
K562_wt_clone-10
GSM3031452
K562_wt_clone-11
GSM3031453
K562_wt_clone-12
GSM3031454
K562_AID-BRD4_clone-1
GSM3031455
K562_AID-BRD4_clone-2
GSM3031456
K562_AID-BRD4_clone-3
GSM3031457
K562_MYC-AID_clone-1
GSM3031458
K562_MYC-AID_clone-2
GSM3031459
K562_MYC-AID_clone-3
GSM3031505
K562_AID-BRD4_input_DMSO
GSM3031506
K562_AID-BRD4_input_IAA
GSM3031507
K562_AID-BRD4_Pol2_DMSO
GSM3031508
K562_AID-BRD4_Pol2_IAA
GSM3031509
K562_AID-BRD4_Pol2-S5P_DMSO
GSM3031510
K562_AID-BRD4_Pol2-S5P_IAA
GSM3031511
K562_AID-BRD4_Pol2-S2P_DMSO
GSM3031512
K562_AID-BRD4_Pol2-S2P_IAA
GSM3031513
K562_AID-BRD4_clone-2_input_DMSO
GSM3031514
K562_AID-BRD4_clone-2_input_IAA
GSM3031515
K562_AID-BRD4_clone-2_Pol2_DMSO
GSM3031516
K562_AID-BRD4_clone-2_Pol2_IAA
GSM3031517
K562_AID-BRD4_clone-2_Pol2-S5P_DMSO
GSM3031518
K562_AID-BRD4_clone-2_Pol2-S5P_IAA
This SuperSeries is composed of the following SubSeries:
GSE100708
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [SLAM-seq]
GSE111457
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq]
GSE111460
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [ChIP-Seq]
Relations
BioProject
PRJNA437109
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE111463_RAW.tar
6.0 Gb
(http)
(custom)
TAR (of BW, TSV)
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