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Series GSE109438 Query DataSets for GSE109438
Status Public on Mar 03, 2019
Title The epigenome and glucocorticoid receptor binding of human monocytes and monocyte-derived macrophages with or without glucocorticoid treatment
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Glucocorticoids (GCs) are essential steroid hormones that regulate the immune system. GCs have been widely used to treat various inflammation disorders and auto-immune diseases due to their potent immune suppressive properties.
 
Overall design Monocytes from healthy donors and the respective monocyte-derived macrophages were cultured in the presence of triamcinolone acetonide (TA) for 4 hours. Cells were then collected for ChIP-seq.
 
Contributor(s) Wang C, Colin L
Citation(s) 30809020
Submission date Jan 19, 2018
Last update date Mar 26, 2019
Contact name Cheng Wang
E-mail(s) jxwangcheng@gmail.com
Phone +31243610533
Organization name Radboud Institute for Molecular Life Sciences
Department Molecular biology
Street address Geert Grooteplein 28
City Nijmegen
ZIP/Postal code 6525 GA
Country Netherlands
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (32)
GSM2942921 Monocyte_Veh_H3K27ac_rep1
GSM2942922 Monocyte_Veh_H3K27ac_rep2
GSM2942923 Monocyte_TA_H3K27ac_rep1
This SubSeries is part of SuperSeries:
GSE109440 Extensive epigenomic integration of the glucocorticoid response in primary human monocytes and in vitro derived macrophages
Relations
BioProject PRJNA430885
SRA SRP131051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109438_RAW.tar 11.0 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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