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Series GSE109274 Query DataSets for GSE109274
Status Public on Feb 13, 2018
Title DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 29700293
Submission date Jan 16, 2018
Last update date Mar 21, 2019
Contact name Seungil Ro
E-mail(s) sro@medicine.nevada.edu
Phone 775-784-1462
Organization name University of Nevada School of Medicine
Department Physiology and Cell Biology
Street address 1664 North Virginia St
City Reno
State/province NV
ZIP/Postal code 89557
Country USA
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2936348 Dnmt1 WT Jejunum [mRNA]
GSM2936349 Dnmt1 KO Jejunum [mRNA]
GSM2936350 Dnmt1 WT Jejunum [miRNA]
This SuperSeries is composed of the following SubSeries:
GSE109272 DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease [RNA-Seq]
GSE109273 DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease [miRNA-Seq]
GSE109641 DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease (BiSulfite-seq)
Relations
BioProject PRJNA430269

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109274_RAW.tar 4.2 Gb (http)(custom) TAR (of BB)
SRA Run SelectorHelp

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