|
| Status |
Public on Jan 12, 2018 |
| Title |
DNA methylation in hESC derived brain organoids and iPSC derived neurons, astrocytes and neural progenitors |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
We studied the impact of ZIKA virus infection on DNA methylation in whole organoids, organoid derived astrocytes, neurons neural progeniotors and hESC or iPSC derived astrocytes, neurons, neural progenotor cells
|
| |
|
| Overall design |
Examination of differences in DNA methylation upon ZIKV infection in whole organoid samples or specific cell types
|
| |
|
| Contributor(s) |
Janssens S, Schotsaert M, Karnik R, Balasubramaniam V, Dejosez M, Meissner A, García-Sastre A, Zwaka TP |
| Citation(s) |
29435496 |
| |
| Submission date |
Jan 11, 2018 |
| Last update date |
Mar 27, 2019 |
| Contact name |
Sylvie Janssens |
| Organization name |
Mount Sinai School of Medicine
|
| Department |
Department for Developmental and Regenerative Biology
|
| Lab |
Zwaka lab
|
| Street address |
1452 Madison Avenue
|
| City |
New York City |
| State/province |
NY |
| ZIP/Postal code |
10029 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (20)
|
|
| Relations |
| BioProject |
PRJNA429640 |
| SRA |
SRP128919 |
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