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Series GSE108952 Query DataSets for GSE108952
Status Public on Mar 15, 2018
Title Developmental history provides a roadmap for the emergence of tumor plasticity
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Sox2 binding was assessed in lung epithelial cells, in the presence or absence of Nkx2-1.
Overall design Examination of Sox2 ChIP-seq binding in lung epithelial cells, with or without Nkx2-1.
Contributor(s) Chow R, Tata PR
Citation(s) 29587142
Submission date Jan 09, 2018
Last update date Mar 19, 2019
Contact name Ryan D Chow
Organization name Yale University
Street address 850 West Campus Drive
City West Haven
State/province CT
ZIP/Postal code 06516
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (9)
GSM2916479 Input DNA: Wildtype
GSM2916480 Input DNA: ectopic Sox2 expression and Nkx2-1 deletion
GSM2916481 Input DNA: ectopic Sox2 expression
BioProject PRJNA429224
SRA SRP128542

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108952_RAW.tar 452.8 Mb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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