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Series GSE108952 Query DataSets for GSE108952
Status Public on Mar 15, 2018
Title Developmental history provides a roadmap for the emergence of tumor plasticity
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Sox2 binding was assessed in lung epithelial cells, in the presence or absence of Nkx2-1.
 
Overall design Examination of Sox2 ChIP-seq binding in lung epithelial cells, with or without Nkx2-1.
 
Contributor(s) Chow R, Tata PR
Citation(s) 29587142
Submission date Jan 09, 2018
Last update date Mar 19, 2019
Contact name Ryan D Chow
E-mail(s) ryan.chow@yale.edu
Organization name Yale University
Street address 850 West Campus Drive
City West Haven
State/province CT
ZIP/Postal code 06516
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (9)
GSM2916479 Input DNA: Wildtype
GSM2916480 Input DNA: ectopic Sox2 expression and Nkx2-1 deletion
GSM2916481 Input DNA: ectopic Sox2 expression
Relations
BioProject PRJNA429224
SRA SRP128542

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108952_RAW.tar 452.8 Mb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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