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Series GSE108097 Query DataSets for GSE108097
Status Public on Feb 14, 2018
Title Mapping Mouse Cell Atlas by Microwell-seq
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We developed Microwell-seq, a high-throughput and low-cost scRNA-seq platform using simple, inexpensive devices. Using Microwell-seq, we constructed a basic scheme for the Mouse Cell Atlas. We reveal single cell hierarchy for many tissues that have not been well previously characterized. Our study demonstrates the wide applicability of the Microwell-seq technology and the Mouse Cell Atlas resource.
Overall design Expression profiling by high throughput sequencing of major mouse organ types.
Contributor(s) Han X, Wang R
Citation(s) 29474909
Submission date Dec 14, 2017
Last update date May 15, 2019
Contact name guoji guo
Organization name Zhejiang University School of Medicine
Department Center for Stem Cell and Regenerative Medicine
Lab guoji guo lab
Street address yuhangtang road 388
City hangzhou
State/province zhejiang
ZIP/Postal code 310058
Country China
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL22245 Illumina HiSeq 2500 (Homo sapiens; Mus musculus)
Samples (90)
GSM2889480 Bladder
GSM2889481 Prostate1
GSM2889482 Prostate2
BioProject PRJNA422441
SRA SRP126776

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108097_MCA_Figure2_BatchRemoved_dge.txt.tar.gz 61.2 Mb (ftp)(http) TAR
GSE108097_RAW.tar 1.8 Gb (http)(custom) TAR (of TAR, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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