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| Status |
Public on Sep 27, 2018 |
| Title |
Transcriptome analysis of PRMT6 knock-out in NT2/D1 cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Whole transcriptome for PRMT6 knock-out and control NT2/D1 cells with and without ATRA (all-trans retinoic acid) was sequenced. These samples were compared to each other to find differentially regulated genes and PRMT6-dependent transcriptome in pluripotency and differentiating cells.
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| |
|
| Overall design |
Examining of PRMT6-dependent transcriptome in NT2/D1 cells using RNAseq.
|
| |
|
| Contributor(s) |
Bouchard C, Sahu P, Nötzold RR, Bauer UM |
| Citation(s) |
30232013, 39900436 |
| |
| Submission date |
Dec 01, 2017 |
| Last update date |
Feb 24, 2025 |
| Contact name |
Uta Maria Bauer |
| E-mail(s) |
bauer@imt.uni-marburg.de
|
| Organization name |
Philipps University Marburg
|
| Department |
Institute of Molecular Biology and Tumor Research
|
| Lab |
AG Bauer
|
| Street address |
Hans-Meerwein-Str. 2
|
| City |
Marburg |
| State/province |
Hessen |
| ZIP/Postal code |
35043 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
|
| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE107612 |
Genomic location of PRMT6-dependent H3R2 methylation is decisive for the transcriptional outcome of associated genes |
|
| Relations |
| BioProject |
PRJNA420764 |
| SRA |
SRP125977 |
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