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| Status |
Public on Feb 14, 2018 |
| Title |
Transcriptome Analysis of Arabidopsis Root Development in Response to Treatment With Rhizobium sp. IRBG74 |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To examine how the Arabidopsis root development responds to the Rhizobium sp. IRBG74 treatment at the molecular level, we performed RNA-seq experiments. Our RNA-seq results suggest that expression of genes mainly involved in auxin signaling, cell wall and cell membrane integrity and transport is altered in response to colonization by Rhizobium sp. IRBG74.
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| |
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| Overall design |
Examination of Arabidopsis roots treated by Rhizobium sp. IRBG74 for 24 and 48 hours.
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| |
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| Contributor(s) |
Zhao D, Huang J |
| Citation(s) |
29354099 |
| |
| Submission date |
Nov 22, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Dazhong Zhao |
| Organization name |
University of Wisconsin-Milwaukee
|
| Department |
Biological Sciences Department
|
| Lab |
Dazhong Zhao
|
| Street address |
3209 N. Maryland Ave
|
| City |
Milwaukee |
| State/province |
WI |
| ZIP/Postal code |
53211 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
|
| Samples (12)
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| Relations |
| BioProject |
PRJNA419538 |
| SRA |
SRP125498 |
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