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Series GSE106973 Query DataSets for GSE106973
Status Public on Mar 29, 2018
Title Single cell RNA sequencing of murine basophil/mast cell progenitors and granulocyte/monocyte progenitors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have performed single cell RNA sequencing of murine bone marrow progenitors to study the early differentiation into the mast cell and basophil lineages.
Overall design Single cell RNA-sequencing of 94 basophil/mast cell progenitors (BMCPs) and 47 granulocyte/monocyte progenitors (GMPs) isolated from bone marrow of three female C57BL/6 mice.
Contributor(s) Dahlin JS, Lau WY, Nestorowa S, Diamanti E, Göttgens B
Citation(s) 29588278
Submission date Nov 16, 2017
Last update date May 15, 2019
Contact name Evangelia Diamanti
Phone 01223 62317
Organization name University of Cambridge
Department Haematology
Lab Gottgens
Street address Wellcome Trust / MRC Building, Hills Road
City Cambridge
ZIP/Postal code CB2 0XY
Country United Kingdom
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (141)
GSM2858515 BMCP_1
GSM2858516 BMCP_2
GSM2858517 BMCP_3
BioProject PRJNA418700
SRA SRP125087

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106973_HTSeq_counts.txt.gz 1.6 Mb (ftp)(http) TXT
GSE106973_extra_sequences.fa.gz 283 b (ftp)(http) FA
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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