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| Status |
Public on Aug 22, 2018 |
| Title |
Single cell RNA sequencing of interneurons of the mouse dorsolateral striatum II |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In order to investigate age-dependent mRNA expression in mouse striatal interneurons, we performed single cell RNA-seq on FACS-isolated fluorescently labeled cells from the dorsal striatum of two mouse lines, 5ht3aEGFP or Lhx6cre::R26R-tdTomat, from either P21-26 or P55-76 animals. We included the ventricular side of the striatum that contains adult born neuroblasts destined for the olfactory bulb.
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| Overall design |
3417 single cells isolated from the mouse dorsal striatum.
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| |
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| Contributor(s) |
Munoz-Manchado AB, Zeisel A, Linnarsson S, Hjerling-Leffler J |
| Citation(s) |
30134177 |
| |
| Submission date |
Nov 08, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Sten Linnarsson |
| Organization name |
Karolinska Institutet
|
| Department |
Medical Biochemistry and Biophysics
|
| Lab |
Molecular Neurobiology
|
| Street address |
Scheeles väg 1
|
| City |
Stockholm |
| ZIP/Postal code |
171 65 |
| Country |
Sweden |
| |
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| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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| Samples (3417)
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| This SubSeries is part of SuperSeries: |
| GSE106708 |
Single cell RNA sequencing of interneurons of the mouse dorsolateral striatum |
|
| Relations |
| BioProject |
PRJNA417709 |
| SRA |
SRP124669 |
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