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Series GSE105071 Query DataSets for GSE105071
Status Public on Apr 05, 2019
Title CTCF occupancy in the mouse telencephalon and medial ganglionic eminence
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary In this study, we wanted to compare CTCF binding sites in whole telencephalon vs medial ganglionic eminence (MGE) at embryonic day E13.5.
 
Overall design ChIP-sequencing for CTCF and input (no antibody) in embryonic day 13.5 telencephelon and medial ganglionic eminence
 
Contributor(s) Berube NG, Elbert A, Levy MA
Citation(s) 30377227
Submission date Oct 17, 2017
Last update date Jul 25, 2021
Contact name Nathalie Berube
E-mail(s) nberube@uwo.ca
Organization name Children's Health Research Institute
Street address 800 Commissioners Road East
City London
State/province Ontario
ZIP/Postal code N6C 2V5
Country Canada
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM2817431 ChIP-seq telencephalon input
GSM2817432 ChIP-seq telencephalon CTCF
GSM2817433 ChIP-seq MGE input
Relations
BioProject PRJNA414585
SRA SRP120133

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105071_RAW.tar 480.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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