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| Status |
Public on Oct 13, 2017 |
| Title |
Ribosome-free RNA sequencing of long noncoding RNAs and circular RNAs in lung adenocarcinoma |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Noncoding RNAs play important roles in various biological processes and diseases, including cancer. Expression profile of circular RNAs (circRNA) is largely unknown in lung adenocarcinoma. This study is designed to explore mRNA, long noncoding RNA (lncRNA), and circRNA in lung adenocarcinoma.
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| Overall design |
9 pairs of lung adenocarcinoma tissues and paired nontumor tissues were collected. Every 3 tumor and every 3 nontumor tissues were pooled together for RNA sequencing, and 6 samples were sequenced. Primary lung adenocarcinoma tissues and paired nontumor tissues were snap frozen with liquid nitrogen immediately after resection and stored in liquid nitrogen till RNA extraction.
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| |
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| Contributor(s) |
Qiu M, Yin R, Li M, Wang J |
| Citation(s) |
29632808 |
| |
| Submission date |
Oct 12, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Mantang Qiu |
| E-mail(s) |
qiumantang@163.com
|
| Phone |
+862583283408
|
| Organization name |
Cancer Institute of Jiangsu Province
|
| Department |
Thoracic Surgery
|
| Street address |
42 Baiziting
|
| City |
Nanjing |
| State/province |
Jiangsu |
| ZIP/Postal code |
210009 |
| Country |
China |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA414037 |
| SRA |
SRP119824 |
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