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Series GSE104613 Query DataSets for GSE104613
Status Public on Jan 28, 2019
Title Genome-wide map of binding sites for HNF4a during hepatic specification of iPS cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary HNF4a has been shown to be critical for hepatocyte differentiation from iPS cells.
 
Overall design Chip-seq was performed on chromatin isolated from iPS cells differentiated to the onset of hepatic specification (day 8).
 
Contributor(s) Duncan SA, De La Forest A
Citation(s) 30597922
Submission date Oct 05, 2017
Last update date Jul 25, 2021
Contact name Stephen A Duncan
E-mail(s) duncanst@musc.edu
Phone 843-792-9104
Organization name Medical University South Carolina
Department Regenerative Medicine and Cell Biology
Lab Duncan Lab
Street address 173 Ashley Avenue, BSB 6th Floor, Room 657A
City Charleston
State/province SC
ZIP/Postal code 29425
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM2804112 iPS Input
GSM2804113 iPS HNF4a ChIP
This SubSeries is part of SuperSeries:
GSE104779 HNF4a Mediated Formation of Hepatic Progenitors
Relations
BioProject PRJNA413299
SRA SRP119444

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104613_RAW.tar 260.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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